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  5. Brara.K00354.1

Brara.K00354.1


Description : component *(SWIB) of SWI-B chromatin-remodeling complexes


Gene families : OG_42_0000976 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00354.1
Cluster HCAA Clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
At2g14880 No alias Expressed protein [Source:UniProtKB/TrEMBL;Acc:O82326] 0.02 Orthogroups_2024-Update
GRMZM2G077088 No alias SWIB/MDM2 domain superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G092200 No alias SWIB/MDM2 domain superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G137600 No alias SWIB/MDM2 domain superfamily protein 0.04 Orthogroups_2024-Update
Seita.1G099300.1 No alias component *(SWIB) of SWI-B chromatin-remodeling complexes 0.03 Orthogroups_2024-Update
Sobic.001G081700.1 No alias component *(SWIB) of SWI-B chromatin-remodeling complexes 0.05 Orthogroups_2024-Update
Sobic.008G107800.1 No alias component *(SWIB) of SWI-B chromatin-remodeling complexes 0.03 Orthogroups_2024-Update
Sopen01g049570 No alias SWIB/MDM2 domain 0.04 Orthogroups_2024-Update
Sopen10g020980 No alias SWIB/MDM2 domain 0.03 Orthogroups_2024-Update
evm.model.tig00001065.38 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098799 outer mitochondrial membrane protein complex IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 67 140
No external refs found!