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  5. Brara.K00427.1

Brara.K00427.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00427.1
Cluster HCAA Clusters: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
At3g29020 No alias Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5] 0.03 Orthogroups_2024-Update
At4g33450 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SZC2] 0.03 Orthogroups_2024-Update
At5g11050 No alias Transcription factor MYB64... 0.02 Orthogroups_2024-Update
Brara.A00456.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.04 Orthogroups_2024-Update
Brara.B03351.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.04 Orthogroups_2024-Update
Brara.I03324.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Glyma.14G086500 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
Glyma.20G034100 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.03 Orthogroups_2024-Update
Pp1s200_41V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.02 Orthogroups_2024-Update
Sobic.003G129000.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 182 228
IPR001005 SANT/Myb 237 277
No external refs found!