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  5. Brara.K00450.1

Brara.K00450.1


Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & neoxanthin cleavage protein


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00450.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
Brara.A03189.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Brara.I04483.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.04 Orthogroups_2024-Update
Glyma.15G250100 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.03 Orthogroups_2024-Update
HORVU5Hr1G054970.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
LOC_Os02g47510 No alias 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... 0.02 Orthogroups_2024-Update
MA_10428505g0020 No alias (at3g14440 : 626.0) Encodes ... 0.02 Orthogroups_2024-Update
PSME_00053495-RA No alias (at3g14440 : 677.0) Encodes ... 0.04 Orthogroups_2024-Update
PSME_00056713-RA No alias (at4g19170 : 585.0) chloroplast-targeted member of a... 0.02 Orthogroups_2024-Update
Potri.011G112400 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.03 Orthogroups_2024-Update
Sopen05g032050 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
CC GO:0070531 BRCA1-A complex IEP Predicted GO
CC GO:0070552 BRISC complex IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 120 574
No external refs found!