Brara.K00472.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.K00472.1
Cluster	HCAA Clusters: Cluster_312

Target	Alias	Description	ECC score	Gene Family Method
A4A49_37618	No alias	nac domain-containing protein 86	0.03	Orthogroups_2024-Update
Bradi1g76732	No alias	vascular related NAC-domain protein 1	0.02	Orthogroups_2024-Update
Brara.G01794.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J00883.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G091490	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.06G080200	No alias	NAC domain containing protein 38	0.03	Orthogroups_2024-Update
Glyma.12G186851	No alias	NTM1-like 8	0.03	Orthogroups_2024-Update
Glyma.16G217400	No alias	NAC domain containing protein 57	0.03	Orthogroups_2024-Update
LOC_Os10g42130	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00027653-RA	No alias	(at5g53950 : 285.0) Transcriptional activator of the NAC...	0.02	Orthogroups_2024-Update
Potri.003G113000	No alias	NAC 007	0.04	Orthogroups_2024-Update
Potri.005G058900	No alias	NAC domain containing protein 82	0.04	Orthogroups_2024-Update
Seita.7G124900.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g081270	No alias	NAC domain protein, (AHRD V3.3 *** A0A061EDT4_THECC)	0.04	Orthogroups_2024-Update
Sopen06g011000	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen11g003870	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update
Sopen11g009640	No alias	No apical meristem (NAM) protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0007265	Ras protein signal transduction	IEP	Predicted GO
BP	GO:0007266	Rho protein signal transduction	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	9	137

External Links

No external refs found!