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  5. Brara.K00478.1

Brara.K00478.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00478.1
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
425306 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
At1g21000 No alias At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70] 0.04 Orthogroups_2024-Update
At5g46710 No alias At5g46710 [Source:UniProtKB/TrEMBL;Acc:Q9FIQ4] 0.03 Orthogroups_2024-Update
Brara.G01074.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G03455.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.09G205300 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.15G200100 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
PSME_00047009-RA No alias (at3g60670 : 176.0) PLATZ transcription factor family... 0.03 Orthogroups_2024-Update
Potri.002G002200 No alias PLATZ transcription factor family protein 0.04 Orthogroups_2024-Update
Seita.6G250600.1 No alias PLATZ-type transcription factor 0.04 Orthogroups_2024-Update
Seita.7G218800.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Solyc06g061240 No alias PLATZ transcription factor family protein (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update
Sopen08g001120 No alias PLATZ transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
MF GO:0032422 purine-rich negative regulatory element binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 89 161
No external refs found!