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  5. Brara.K00484.1

Brara.K00484.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00484.1
Cluster HCAA Clusters: Cluster_368

Target Alias Description ECC score Gene Family Method Actions
A4A49_05911 No alias putative transcriptional regulator rabbit ears 0.04 Orthogroups_2024-Update
A4A49_09167 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
A4A49_36210 No alias zinc finger protein 5 0.03 Orthogroups_2024-Update
At1g68360 No alias Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1] 0.04 Orthogroups_2024-Update
At5g25160 No alias ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56] 0.03 Orthogroups_2024-Update
Brara.G03704.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.J02267.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.04 Orthogroups_2024-Update
Glyma.08G217100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G356600 No alias C2H2-like zinc finger protein 0.05 Orthogroups_2024-Update
Glyma.15G004100 No alias zinc-finger protein 1 0.04 Orthogroups_2024-Update
LOC_Os02g01090 No alias ZOS2-01 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g42250 No alias ZOS12-10 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_424g0010 No alias (at5g48890 : 80.5) C2H2-like zinc finger protein;... 0.04 Orthogroups_2024-Update
Potri.001G298700 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Potri.002G041700 No alias zinc finger protein 11 0.05 Orthogroups_2024-Update
Seita.9G170900.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G441500.2 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc10g078970 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen09g024930 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predicted GO
MF GO:0004107 chorismate synthase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!