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  5. Brara.K00541.1

Brara.K00541.1


Description : GDP-D-mannose pyrophosphorylase *(VTC1) & EC_2.7 transferase transferring phosphorus-containing group & GDP-D-mannose pyrophosphorylase *(VTC1)


Gene families : OG_42_0001922 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.K00541.1
Cluster HCAA Clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G160506 No alias Glucose-1-phosphate adenylyltransferase family protein 0.03 Orthogroups_2024-Update
MA_106343g0010 No alias (at2g39770 : 618.0) Encodes a GDP-mannose... 0.04 Orthogroups_2024-Update
PSME_00045480-RA No alias (at2g39770 : 499.0) Encodes a GDP-mannose... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016779 nucleotidyltransferase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR005835 NTP_transferase_dom 2 234
IPR001451 Hexapep 264 289
No external refs found!