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  5. Brara.K00557.1

Brara.K00557.1


Description : Unknown function


Gene families : OG_42_0000946 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00557.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_23682 No alias cell division cycle 20.1, cofactor of apc complex 0.03 Orthogroups_2024-Update
At4g33260 No alias Cell division cycle 20.2, cofactor of APC complex... 0.06 Orthogroups_2024-Update
Glyma.01G229600 No alias Transducin family protein / WD-40 repeat family protein 0.11 Orthogroups_2024-Update
Glyma.11G012400 No alias Transducin family protein / WD-40 repeat family protein 0.09 Orthogroups_2024-Update
HORVU6Hr1G068080.1 No alias substrate specificity component *(CDC20) of APC/C E3... 0.02 Orthogroups_2024-Update
PSME_00010285-RA No alias (at4g33260 : 336.0) putative cdc20 protein (CDC20.2);... 0.03 Orthogroups_2024-Update
PSME_00029486-RA No alias (at4g33260 : 397.0) putative cdc20 protein (CDC20.2);... 0.02 Orthogroups_2024-Update
Solyc03g096870 No alias cell division control 20-1 0.06 Orthogroups_2024-Update
Solyc06g072830 No alias WD40 repeat-containing protein (AHRD V3.3 *** A0A103YEC3_CYNCS) 0.11 Orthogroups_2024-Update
Sopen06g029210 No alias WD domain, G-beta repeat 0.07 Orthogroups_2024-Update
evm.model.contig_2294.2 No alias (at4g33260 : 340.0) putative cdc20 protein (CDC20.2);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 95 144
IPR001680 WD40_repeat 278 313
IPR001680 WD40_repeat 154 189
No external refs found!