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  5. Brara.K00571.1

Brara.K00571.1


Description : Unknown function


Gene families : OG_42_0000379 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00571.1
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
At1g65990 No alias Peroxiredoxin-2A [Source:UniProtKB/Swiss-Prot;Acc:Q7G959] 0.03 Orthogroups_2024-Update
At3g17490 No alias Putative F-box protein At3g17490... 0.03 Orthogroups_2024-Update
At3g19890 No alias F-box protein At3g19890 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSN8] 0.03 Orthogroups_2024-Update
At3g20700 No alias F-box associated ubiquitination effector family protein... 0.03 Orthogroups_2024-Update
At3g22350 No alias F-box and associated interaction domains-containing... 0.04 Orthogroups_2024-Update
At3g22870 No alias Putative F-box/kelch-repeat protein At3g22870... 0.04 Orthogroups_2024-Update
Brara.D02210.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G02249.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 138 309
No external refs found!