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  5. Brara.K00580.1

Brara.K00580.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00580.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Bradi2g26180 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Glyma.09G211000 No alias early-responsive to dehydration stress protein (ERD4) 0.04 Orthogroups_2024-Update
Glyma.11G152700 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Orthogroups_2024-Update
Seita.9G142100.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Sobic.003G181600.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 374 646
IPR032880 Csc1_N 7 180
IPR027815 PHM7_cyt 202 363
No external refs found!