1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.K00675.1

Brara.K00675.1


Description : calcium sensor *(CBL)


Gene families : OG_42_0000326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00675.1
Cluster HCAA Clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
At5g55990 No alias Calcineurin B-like protein 2... 0.03 Orthogroups_2024-Update
GRMZM2G110080 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Seita.1G130300.1 No alias calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL) 0.04 Orthogroups_2024-Update
Sobic.001G294300.1 No alias calcium sensor *(CBL) 0.02 Orthogroups_2024-Update
Sobic.004G130600.2 No alias calcium-dependent SOS2 activator SOS3 & calcium sensor *(CBL) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006897 endocytosis IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
CC GO:0070176 DRM complex IEP Predicted GO
CC GO:0090568 nuclear transcriptional repressor complex IEP Predicted GO
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 192 213
IPR002048 EF_hand_dom 75 119
No external refs found!