Brara.K00682.1

Description : transcription factor *(A/B-GATA)

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.K00682.1
Cluster	HCAA Clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
At4g36620	No alias	GATA transcription factor 19...	0.03	Orthogroups_2024-Update
Bradi1g78540	No alias	GATA transcription factor 2	0.02	Orthogroups_2024-Update
Bradi3g50160	No alias	GATA transcription factor 4	0.03	Orthogroups_2024-Update
Bradi4g41570	No alias	GATA transcription factor 9	0.02	Orthogroups_2024-Update
Brara.K01308.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Glyma.08G142500	No alias	GATA type zinc finger transcription factor family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G076000.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
LOC_Os02g12790	No alias	GATA zinc finger domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_82238g0030	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00007174-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Potri.007G016600	No alias	GATA transcription factor 5	0.03	Orthogroups_2024-Update
Seita.1G358400.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Seita.7G183600.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Sopen03g006450	No alias	GATA zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006066	alcohol metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
BP	GO:0016093	polyprenol metabolic process	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
BP	GO:0019348	dolichol metabolic process	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	208	241

External Links

No external refs found!

Brara.K00682.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation