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  5. Brara.K00811.1

Brara.K00811.1


Description : Unknown function


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00811.1
Cluster HCAA Clusters: Cluster_405

Target Alias Description ECC score Gene Family Method Actions
Brara.C03185.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g37050 No alias transposon protein, putative, Mutator sub-class, expressed 0.03 Orthogroups_2024-Update
Solyc01g034110 No alias No description available 0.04 Orthogroups_2024-Update
Solyc07g042060 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g045650 No alias No description available 0.01 Orthogroups_2024-Update
Solyc10g055510 No alias No description available 0.04 Orthogroups_2024-Update
Sopen06g023740 No alias MuDR family transposase 0.02 Orthogroups_2024-Update
Sopen07g013190 No alias MULE transposase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004332 Transposase_MuDR 350 407
IPR007527 Znf_SWIM 795 824
IPR018289 MULE_transposase_dom 548 642
No external refs found!