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  5. Brara.K00833.1

Brara.K00833.1


Description : Unknown function


Gene families : OG_42_0000284 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00833.1
Cluster HCAA Clusters: Cluster_377

Target Alias Description ECC score Gene Family Method Actions
Brara.B01316.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os12g08490 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc05g014520 No alias No description available 0.03 Orthogroups_2024-Update
Sopen10g027270 No alias MuDR family transposase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP Predicted GO
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 659 685
IPR018289 MULE_transposase_dom 410 505
No external refs found!