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  5. Brara.K00975.1

Brara.K00975.1


Description : component *(JAZ) of jasmonic acid receptor complex & TIFY-type transcription factor


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00975.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Brara.I04752.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G041260.6 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g08310 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g26780 No alias zinc-finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g25230 No alias ZIM domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10238292g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00046059-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.2G388400.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.05 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G517900.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G343900.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.04 Orthogroups_2024-Update
Sobic.001G482700.1 No alias TIFY-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 211 236
IPR010399 Tify_dom 121 153
No external refs found!