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  5. Brara.K00984.1

Brara.K00984.1


Description : Unknown function


Gene families : OG_42_0001036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K00984.1
Cluster HCAA Clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
At2g33020 No alias Receptor like protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O49329] 0.04 Orthogroups_2024-Update
At3g25010 No alias Receptor like protein 41 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP5] 0.03 Orthogroups_2024-Update
At4g13820 No alias Disease resistance like protein... 0.03 Orthogroups_2024-Update
Brara.D00693.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H03015.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I05473.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000813 ESCRT I complex IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 671 726
IPR001611 Leu-rich_rpt 496 554
IPR001611 Leu-rich_rpt 128 150
No external refs found!