Description : 60S ribosomal protein L36-1 [Source:UniProtKB/Swiss-Prot;Acc:O80929]
Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At2g37600 | |
Cluster | HCCA clusters: Cluster_99 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
267958 | No alias | Ribosomal protein L36e family protein | 0.03 | Orthogroups_2024-Update | |
439710 | No alias | Ribosomal protein L36e family protein | 0.04 | Orthogroups_2024-Update | |
Bradi1g03700 | No alias | Ribosomal protein L36e family protein | 0.01 | Orthogroups_2024-Update | |
Bradi2g23260 | No alias | Ribosomal protein L36e family protein | 0.13 | Orthogroups_2024-Update | |
Brara.C01889.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
Brara.D02287.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.E00749.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.15 | Orthogroups_2024-Update | |
Brara.G01608.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Brara.I03660.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre12.g484050 | No alias | Ribosomal protein L36e family protein | 0.13 | Orthogroups_2024-Update | |
GRMZM5G850966 | No alias | Ribosomal protein L36e family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.10G233900 | No alias | Ribosomal protein L36e family protein | 0.07 | Orthogroups_2024-Update | |
Glyma.19G047300 | No alias | Ribosomal protein L36e family protein | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G072270.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
HORVU3Hr1G086410.2 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G009610.2 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
LOC_Os05g38520 | No alias | 60S ribosomal protein L36-2, putative, expressed | 0.06 | Orthogroups_2024-Update | |
Mp1g05460.1 | No alias | component RPL36 of LSU proteome component | 0.05 | Orthogroups_2024-Update | |
PSME_00032528-RA | No alias | (at3g53740 : 137.0) Ribosomal protein L36e family... | 0.07 | Orthogroups_2024-Update | |
PSME_00032530-RA | No alias | (at3g53740 : 141.0) Ribosomal protein L36e family... | 0.05 | Orthogroups_2024-Update | |
PSME_00049847-RA | No alias | (at3g53740 : 141.0) Ribosomal protein L36e family... | 0.07 | Orthogroups_2024-Update | |
Potri.004G057000 | No alias | Ribosomal protein L36e family protein | 0.08 | Orthogroups_2024-Update | |
Potri.012G142600 | No alias | Ribosomal protein L36e family protein | 0.08 | Orthogroups_2024-Update | |
Pp1s249_65V6 | No alias | 60s ribosomal protein l36-2 | 0.08 | Orthogroups_2024-Update | |
Pp1s34_151V6 | No alias | 60s ribosomal protein l36-2 | 0.04 | Orthogroups_2024-Update | |
Pp1s84_102V6 | No alias | 60s ribosomal protein l36-2 | 0.07 | Orthogroups_2024-Update | |
Seita.3G217000.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Seita.5G376500.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Sobic.009G163800.1 | No alias | component *(eL36) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Solyc03g025520 | No alias | 60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC) | 0.12 | Orthogroups_2024-Update | |
Solyc06g036050 | No alias | 60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC) | 0.1 | Orthogroups_2024-Update | |
Sopen03g004360 | No alias | Ribosomal protein L36e | 0.09 | Orthogroups_2024-Update | |
Sopen06g011800 | No alias | Ribosomal protein L36e | 0.06 | Orthogroups_2024-Update | |
evm.model.contig_3387.3 | No alias | (at2g37600 : 125.0) Ribosomal protein L36e family... | 0.05 | Orthogroups_2024-Update | |
evm.model.tig00021493.69 | No alias | (at2g37600 : 127.0) Ribosomal protein L36e family... | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
MF | GO:0097747 | RNA polymerase activity | IEP | Predicted GO |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000509 | Ribosomal_L36e | 8 | 101 |
No external refs found! |