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  5. Brara.K01006.1

Brara.K01006.1


Description : Unknown function


Gene families : OG_42_0004144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01006.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Potri.001G242900 No alias Function unknown 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018816 Cactin_central 5 154
No external refs found!