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  5. Brara.K01119.1

Brara.K01119.1


Description : Unknown function


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01119.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G160600 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Glyma.07G171700 No alias PIF1 helicase 0.04 Orthogroups_2024-Update
Glyma.15G190000 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.15G193800 No alias PIF1 helicase 0.04 Orthogroups_2024-Update
LOC_Os05g14380 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc07g042790 No alias LOW QUALITY:Helicase-like protein (AHRD V3.3 *** Q9AYF0_ORYSJ) 0.02 Orthogroups_2024-Update
Sopen08g012630 No alias Helitron helicase-like domain at N-terminus 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA 16Dec
MF GO:0003678 DNA helicase activity IEA 16Dec
BP GO:0006281 DNA repair IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 217 378
IPR010285 DNA_helicase_pif1-like 795 1159
No external refs found!