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  5. Brara.K01297.1

Brara.K01297.1


Description : Unknown function


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01297.1
Cluster HCAA Clusters: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G450935 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.01G135100 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.09G080200 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.12G111300 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.20G059700 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os05g19050 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Seita.1G070500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g074420 No alias LOW QUALITY:AT hook motif-containing protein, putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA 16Dec
MF GO:0003678 DNA helicase activity IEA 16Dec
BP GO:0006281 DNA repair IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025476 Helitron_helicase-like 280 462
IPR010285 DNA_helicase_pif1-like 970 1332
No external refs found!