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  5. Brara.K01315.1

Brara.K01315.1


Description : E2 ubiquitin-conjugating enzyme *(UBC15)


Gene families : OG_42_0002163 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002163_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.K01315.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Brara.E01872.1 No alias E2 ubiquitin-conjugating enzyme *(UBC15) 0.03 Orthogroups_2024-Update
LOC_Os03g47770 No alias ubiquitin-conjugating enzyme E2 W, putative, expressed 0.03 Orthogroups_2024-Update
Potri.007G018700 No alias ubiquitin-conjugating enzyme 16 0.03 Orthogroups_2024-Update
Solyc02g084760 No alias Ubiquitin conjugating enzyme (AHRD V3.3 *** A6MUS6_GOSHI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 19 155
No external refs found!