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  5. Brara.K01347.1

Brara.K01347.1


Description : Unknown function


Gene families : OG_42_0000448 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01347.1
Cluster HCAA Clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Brara.A00274.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.G00289.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.005G103800 No alias Arabidopsis protein of unknown function (DUF241) 0.02 Orthogroups_2024-Update
Solyc02g083070 No alias LOW QUALITY:DUF241 domain protein (AHRD V3.3 *** G7LA86_MEDTR) 0.04 Orthogroups_2024-Update
Sopen02g027830 No alias Arabidopsis protein of unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0048364 root development IEA 16Dec
BP GO:0048367 shoot system development IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004320 DUF241_pln 56 314
No external refs found!