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  5. Brara.K01537.1

Brara.K01537.1


Description : RNA editing factor *(CRR28)


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01537.1
Cluster HCAA Clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Bradi1g36900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Brara.A03095.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.20G163300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G209900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G272600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G275900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 529 623
IPR002885 Pentatricopeptide_repeat 104 134
IPR002885 Pentatricopeptide_repeat 179 204
IPR002885 Pentatricopeptide_repeat 308 356
IPR002885 Pentatricopeptide_repeat 206 251
No external refs found!