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  5. Brara.K01628.1

Brara.K01628.1


Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase


Gene families : OG_42_0002014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01628.1
Cluster HCAA Clusters: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
420760 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
A4A49_19432 No alias putative pectinesterasepectinesterase inhibitor 51 0.03 Orthogroups_2024-Update
GRMZM2G167637 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.05G190300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Orthogroups_2024-Update
PSME_00008314-RA No alias (at5g09760 : 445.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
PSME_00027673-RA No alias (at5g09760 : 434.0) Plant invertase/pectin... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 2 221
No external refs found!