1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.K01724.1

Brara.K01724.1


Description : calcium sensor *(CML)


Gene families : OG_42_0003779 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003779_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01724.1
Cluster HCAA Clusters: Cluster_399

Target Alias Description ECC score Gene Family Method Actions
A4A49_01283 No alias putative calcium-binding protein cml45 0.03 Orthogroups_2024-Update
A4A49_32283 No alias putative calcium-binding protein cml45 0.03 Orthogroups_2024-Update
Glyma.18G260700 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Potri.017G084800 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Sopen02g032800 No alias EF hand 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 82 147
No external refs found!