1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.K01859.1

Brara.K01859.1


Description : Unknown function


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.K01859.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Brara.B01178.1 No alias deubiquitinase *(UBP23) 0.04 Orthogroups_2024-Update
Solyc08g076910 No alias Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g096430 No alias LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase family... 0.04 Orthogroups_2024-Update
Sopen08g025480 No alias Ubiquitin carboxyl-terminal hydrolase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEA 16Dec
BP GO:0016579 protein deubiquitination IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 108 413
No external refs found!