1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU0Hr1G001300.1

HORVU0Hr1G001300.1


Description : STAR-type post-transcriptionally regulatory factor


Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G001300.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
At5g56140 No alias KH domain-containing protein At5g56140... 0.03 Orthogroups_2024-Update
Bradi1g04120 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
Bradi2g22090 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
Brara.C01953.1 No alias STAR-type post-transcriptionally regulatory factor 0.02 Orthogroups_2024-Update
GRMZM2G108677 No alias RNA-binding KH domain-containing protein 0.03 Orthogroups_2024-Update
Seita.1G300900.1 No alias STAR-type post-transcriptionally regulatory factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 143 187
IPR032377 STAR_dimer 30 74
No external refs found!