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  5. HORVU0Hr1G001350.1

HORVU0Hr1G001350.1


Description : TUB-type transcription factor


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G001350.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18380 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Bradi2g19960 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Cre12.g520650 No alias tubby like protein 1 0.02 Orthogroups_2024-Update
GRMZM5G866954 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Mp6g01640.1 No alias transcription factor (TUB) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 2 232
No external refs found!