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  5. HORVU0Hr1G003810.1

HORVU0Hr1G003810.1


Description : E3 ubiquitin ligase


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G003810.1
Cluster HCAA Clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44390 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Brara.C01808.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G196301 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Glyma.03G202600 No alias plant U-box 22 0.02 Orthogroups_2024-Update
Glyma.12G189000 No alias plant U-box 23 0.02 Orthogroups_2024-Update
HORVU4Hr1G064070.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os04g35680 No alias U-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_17715g0010 No alias "(at1g66160 : 253.0) ""CYS, MET, PRO, and GLY protein... 0.03 Orthogroups_2024-Update
PSME_00056761-RA No alias (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... 0.02 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.03 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.02 Orthogroups_2024-Update
Pp1s109_251V6 No alias u-box domain-containing protein 0.02 Orthogroups_2024-Update
Solyc04g071030 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
BP GO:0016567 protein ubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 10 83
No external refs found!