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  5. HORVU0Hr1G004650.4

HORVU0Hr1G004650.4


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G004650.4
Cluster HCAA Clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
At3g29810 No alias COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7] 0.03 Orthogroups_2024-Update
Bradi5g17087 No alias COBRA-like protein 1 precursor 0.08 Orthogroups_2024-Update
Brara.H02796.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Glyma.02G196100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Glyma.06G005800 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Glyma.13G053200 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.18G271900 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Glyma.18G272100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.19G033600 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
MA_40967g0020 No alias (q60e70|cobl3_orysa : 658.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
PSME_00031309-RA No alias (q6z4g8|cobl1_orysa : 643.0) COBRA-like 1 protein... 0.01 Orthogroups_2024-Update
Potri.004G117100 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Potri.004G167100 No alias COBRA-like protein 1 precursor 0.01 Orthogroups_2024-Update
Sobic.001G336700.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.07 Orthogroups_2024-Update
Solyc02g089130 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.03 Orthogroups_2024-Update
Solyc03g114890 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 47 210
No external refs found!