1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU0Hr1G005350.1

HORVU0Hr1G005350.1


Description : regulatory protein *(AGO7) of transacting siRNA pathway


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G005350.1
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
At2g27040 No alias Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5] 0.03 Orthogroups_2024-Update
At5g21150 No alias Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0] 0.04 Orthogroups_2024-Update
At5g43810 No alias Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1] 0.03 Orthogroups_2024-Update
Bradi5g21810 No alias Argonaute family protein 0.03 Orthogroups_2024-Update
Glyma.06G213300 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
Solyc01g096750 No alias Argonaute4d 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR003100 PAZ_dom 383 504
IPR003165 Piwi 668 972
IPR014811 ArgoL1 321 369
IPR032474 Argonaute_N 167 310
No external refs found!