HORVU0Hr1G009930.2


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G009930.2
Cluster HCAA Clusters: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Bradi1g36010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g36900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g40080 No alias mitochondrial editing factor 19 0.03 Orthogroups_2024-Update
Bradi4g22520 No alias mitochondrial editing factor 22 0.03 Orthogroups_2024-Update
Glyma.16G035600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G018170.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G067540.5 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU6Hr1G065970.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os01g10800 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g60200 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g36350 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g41040 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g09370 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g15570 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g30760 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g06650 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
MA_755187g0010 No alias (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00054674-RA No alias (at4g33170 : 289.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Potri.001G466066 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G034900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G147900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G290500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G016300.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G030100.1 No alias RNA editing factor *(CWM1) 0.03 Orthogroups_2024-Update
Sobic.003G380100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g092150 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g096680 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen01g032600 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 422 465
IPR002885 Pentatricopeptide_repeat 315 363
IPR002885 Pentatricopeptide_repeat 189 215
IPR002885 Pentatricopeptide_repeat 391 412
IPR002885 Pentatricopeptide_repeat 290 310
IPR002885 Pentatricopeptide_repeat 217 246
No external refs found!