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  5. HORVU0Hr1G012490.26

HORVU0Hr1G012490.26


Description : siRNA-integrating factor *(AGO)


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G012490.26
Cluster HCAA Clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
A4A49_36480 No alias protein argonaute 1b 0.02 Orthogroups_2024-Update
PSME_00001016-RA No alias (at5g43810 : 1422.0) Encodes a member of the EIF2C... 0.03 Orthogroups_2024-Update
Seita.9G138800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G053700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G136150.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR003100 PAZ_dom 257 382
IPR014811 ArgoL1 202 249
IPR003165 Piwi 536 844
IPR032472 ArgoL2 392 436
IPR032474 Argonaute_N 32 190
No external refs found!