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  5. HORVU0Hr1G014900.1

HORVU0Hr1G014900.1


Description : Trihelix-type transcription factor


Gene families : OG_42_0000788 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000788_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G014900.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_32631 No alias trihelix transcription factor gt-2 0.03 Orthogroups_2024-Update
Glyma.16G167500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G166800 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Sopen04g027330 No alias Myb/SANT-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen11g007460 No alias Myb/SANT-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!