1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU0Hr1G015840.1

HORVU0Hr1G015840.1


Description : exoribonuclease *(RNase J)


Gene families : OG_42_0003719 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003719_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G015840.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G015830.1 No alias exoribonuclease *(RNase J) 0.03 Orthogroups_2024-Update
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.02 Orthogroups_2024-Update
Pp1s192_99V6 No alias MLE2.5; hydrolase family [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 76 212
No external refs found!