1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU0Hr1G022360.1

HORVU0Hr1G022360.1


Description : Unknown function


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G022360.1
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
405960 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
429523 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
80819 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
90809 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Bradi3g31630 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Bradi3g35310 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Bradi4g28870 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Brara.B02055.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H02650.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G434500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
Glyma.13G350300 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
Glyma.15G024200 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Glyma.20G154800 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 Orthogroups_2024-Update
LOC_Os02g45530 No alias HOTHEAD precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g48400 No alias HOTHEAD precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g19930 No alias HOTHEAD precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00029110-RA No alias (at1g72970 : 214.0) Originally identified as a mutation... 0.03 Orthogroups_2024-Update
PSME_00032064-RA No alias (at1g12570 : 349.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00050139-RA No alias (at1g14190 : 444.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
Potri.001G111500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Potri.001G200800 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
Seita.2G186600.1 No alias omega-hydroxy fatty acyl dehydrogenase *(HOTHEAD) 0.04 Orthogroups_2024-Update
Solyc06g035580 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.02 Orthogroups_2024-Update
Sopen06g022090 No alias GMC oxidoreductase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA 16Dec
MF GO:0050660 flavin adenine dinucleotide binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000782 telomere cap complex IEP Predicted GO
CC GO:0000783 nuclear telomere cap complex IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:1990879 CST complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 416 566
IPR000172 GMC_OxRdtase_N 127 344
No external refs found!