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At2g39770


Description : VTC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW16]


Gene families : OG_42_0001922 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g39770
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G085830.1 No alias GDP-D-mannose pyrophosphorylase *(VTC1) & GDP-D-mannose... 0.03 Orthogroups_2024-Update
LOC_Os03g16150 No alias mannose-1-phosphate guanyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
MA_106343g0010 No alias (at2g39770 : 618.0) Encodes a GDP-mannose... 0.03 Orthogroups_2024-Update
PSME_00049017-RA No alias (at2g39770 : 639.0) Encodes a GDP-mannose... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016779 nucleotidyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001451 Hexapep 261 295
IPR005835 NTP_transferase_dom 2 229
No external refs found!