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  5. HORVU0Hr1G038830.19

HORVU0Hr1G038830.19


Description : subunit alpha of Cpn60 chaperonin complex & subunit alpha of CPN60 assembly chaperone heterodimer & chaperone *(Hsp60)


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G038830.19
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
At5g56500 No alias Chaperonin 60 subunit beta 3, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
Bradi2g18260 No alias heat shock protein 60-3A 0.04 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.09 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.07 Orthogroups_2024-Update
Brara.C01696.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.C02414.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.07 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
GRMZM2G083716 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.05 Orthogroups_2024-Update
Glyma.01G069500 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Glyma.07G009600 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Glyma.20G079300 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.02 Orthogroups_2024-Update
MA_10436324g0010 No alias (at3g23990 : 851.0) mitochondrial chaperonin HSP. assist... 0.04 Orthogroups_2024-Update
Mp6g16880.1 No alias chaperone (Hsp60) 0.03 Orthogroups_2024-Update
Potri.001G054400 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Potri.002G252900 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Potri.003G173900 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
Potri.010G135100 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
Pp1s276_75V6 No alias ru large subunit-binding protein subunit beta 0.02 Orthogroups_2024-Update
Seita.2G129300.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.06 Orthogroups_2024-Update
Sobic.001G228200.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Sobic.002G131000.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.02 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.06 Orthogroups_2024-Update
Solyc03g121640 No alias Chaperonin Cpn60 (AHRD V3.3 *** A0A124SDT3_CYNCS) 0.05 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.08 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen05g031970 No alias TCP-1/cpn60 chaperonin family 0.05 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 65 567
No external refs found!