1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU0Hr1G039200.7

HORVU0Hr1G039200.7


Description : E3 ubiquitin ligase *(XBAT3)


Gene families : OG_42_0001910 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001910_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU0Hr1G039200.7
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Pp1s55_144V6 No alias ankyrin repeat-containing 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 88 208
IPR002110 Ankyrin_rpt 20 81
IPR002110 Ankyrin_rpt 219 277
No external refs found!