Description : Unknown function
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Hordeum vulgare: HORVU1Hr1G001970.1 | |
Cluster | HCAA Clusters: Cluster_166 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_29197 | No alias | ring-h2 finger protein atl73 | 0.03 | Orthogroups_2024-Update | |
Bradi5g19960 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g07140 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os12g02210 | No alias | RING finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.003G073300 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.013G025800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s20_280V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
Seita.1G197500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.1G197600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.008G030200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sopen12g029870 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
MF | GO:0004615 | phosphomannomutase activity | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Predicted GO |
BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Predicted GO |
BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | Predicted GO |
BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | Predicted GO |
BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
BP | GO:0009725 | response to hormone | IEP | Predicted GO |
BP | GO:0009733 | response to auxin | IEP | Predicted GO |
BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
BP | GO:0019673 | GDP-mannose metabolic process | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 17 | 44 |
No external refs found! |