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  5. HORVU1Hr1G004960.1

HORVU1Hr1G004960.1


Description : scaffold nucleoporin of nuclear pore complex *(RAE1)


Gene families : OG_42_0003952 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G004960.1
Cluster HCAA Clusters: Cluster_83


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 92 117
IPR001680 WD40_repeat 296 335
IPR001680 WD40_repeat 174 203
IPR001680 WD40_repeat 131 160
No external refs found!