At2g40740

Description : WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At2g40740
Cluster	HCCA clusters: Cluster_191

Target	Alias	Description	ECC score	Gene Family Method
29146	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
81371	No alias	WRKY DNA-binding protein 9	0.03	Orthogroups_2024-Update
A4A49_11091	No alias	wrky transcription factor 22	0.03	Orthogroups_2024-Update
A4A49_13674	No alias	putative wrky transcription factor 48	0.05	Orthogroups_2024-Update
A4A49_19262	No alias	putative wrky transcription factor 40	0.03	Orthogroups_2024-Update
A4A49_21524	No alias	putative wrky transcription factor 20	0.03	Orthogroups_2024-Update
At2g46400	No alias	Probable WRKY transcription factor 46...	0.03	Orthogroups_2024-Update
At4g18170	No alias	WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]	0.04	Orthogroups_2024-Update
At4g26440	No alias	Probable WRKY transcription factor 34...	0.04	Orthogroups_2024-Update
At5g07100	No alias	Probable WRKY transcription factor 26...	0.03	Orthogroups_2024-Update
Bradi1g63220	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Bradi2g33540	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
Bradi2g44090	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
Bradi4g19060	No alias	WRKY DNA-binding protein 75	0.04	Orthogroups_2024-Update
Bradi4g28280	No alias	WRKY DNA-binding protein 46	0.03	Orthogroups_2024-Update
Brara.A00933.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.A03925.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.B02390.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Brara.D00225.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.F03624.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G02914.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01800.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Brara.H01956.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I02227.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J01462.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00205.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.K00397.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
GRMZM5G812272	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
Glyma.01G053800	No alias	WRKY DNA-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.01G224800	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Glyma.02G115200	No alias	WRKY DNA-binding protein 57	0.01	Orthogroups_2024-Update
Glyma.03G256700	No alias	WRKY DNA-binding protein 30	0.04	Orthogroups_2024-Update
Glyma.04G173500	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.04G218700	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Glyma.08G142400	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Glyma.08G143400	No alias	WRKY DNA-binding protein 13	0.03	Orthogroups_2024-Update
Glyma.08G240800	No alias	WRKY DNA-binding protein 4	0.04	Orthogroups_2024-Update
Glyma.09G034300	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Glyma.13G267500	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Glyma.14G185800	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Glyma.14G186100	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
Glyma.16G054400	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Glyma.17G224800	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
Glyma.20G163200	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
HORVU0Hr1G001430.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G027700.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
HORVU1Hr1G080300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G090190.6	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU2Hr1G029460.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G021260.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G113850.4	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g14440	No alias	WRKY1, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g53260	No alias	WRKY23, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g54600	No alias	WRKY13, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g08440	No alias	WRKY71, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g16540	No alias	WRKY39, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g43560	No alias	WRKY34, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g20550	No alias	WRKY55, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g46020	No alias	WRKY7, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g02420	No alias	WRKY97, expressed	0.02	Orthogroups_2024-Update
MA_10425932g0020	No alias	(at5g13080 : 160.0) WRKY75 is one of several...	0.03	Orthogroups_2024-Update
MA_10432362g0010	No alias	(at1g69310 : 113.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_11072g0010	No alias	(at1g68150 : 82.4) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_134559g0010	No alias	(at1g62300 : 80.9) Encodes a transcription factor WRKY6....	0.03	Orthogroups_2024-Update
MA_175750g0010	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
MA_381058g0010	No alias	(at1g68150 : 80.5) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_83250g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_91468g0010	No alias	(at4g01720 : 124.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00000342-RA	No alias	(at1g29280 : 114.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00008606-RA	No alias	(at5g56270 : 338.0) WRKY transcription factor 2; WRKY...	0.05	Orthogroups_2024-Update
PSME_00013774-RA	No alias	(at1g62300 : 180.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00015239-RA	No alias	(at1g18860 : 197.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00028886-RA	No alias	(at5g15130 : 207.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00030013-RA	No alias	(at2g38470 : 151.0) Member of the plant WRKY...	0.03	Orthogroups_2024-Update
PSME_00033789-RA	No alias	(at2g38470 : 152.0) Member of the plant WRKY...	0.01	Orthogroups_2024-Update
PSME_00035159-RA	No alias	(at1g29860 : 115.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00036434-RA	No alias	(at1g62300 : 153.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00037224-RA	No alias	(at2g38470 : 152.0) Member of the plant WRKY...	0.01	Orthogroups_2024-Update
PSME_00039002-RA	No alias	(at5g26170 : 112.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00039003-RA	No alias	(at1g29860 : 112.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00040625-RA	No alias	(at1g62300 : 128.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00041689-RA	No alias	(at1g29860 : 111.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00046716-RA	No alias	(at4g01720 : 148.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00051212-RA	No alias	(at4g11070 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00053369-RA	No alias	(at2g34830 : 184.0) member of WRKY Transcription Factor;...	0.01	Orthogroups_2024-Update
Potri.001G044500	No alias	WRKY DNA-binding protein 40	0.04	Orthogroups_2024-Update
Potri.001G352400	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.04	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.005G203200	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
Potri.006G133200	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.008G091900	No alias	WRKY DNA-binding protein 4	0.04	Orthogroups_2024-Update
Potri.011G007800	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.04	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.04	Orthogroups_2024-Update
Pp1s235_126V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.02	Orthogroups_2024-Update
Pp1s25_173V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.02	Orthogroups_2024-Update
Seita.2G003100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G206100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G145000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G170400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G206900.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G132700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G294500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G306000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.6G132800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G301900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.8G123100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G084400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G037400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G138400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G248400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.003G296300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G077466.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G034800.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G171600.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g072190	No alias	WRKY transcription factor 79	0.02	Orthogroups_2024-Update
Solyc03g095770	No alias	WRKY transcription factor 80	0.03	Orthogroups_2024-Update
Solyc04g051690	No alias	WRKY transcription factor 51	0.04	Orthogroups_2024-Update
Solyc04g072070	No alias	WRKY transcription factor 55	0.04	Orthogroups_2024-Update
Solyc08g067360	No alias	WRKY transcription factor 45	0.04	Orthogroups_2024-Update
Solyc09g014990	No alias	WRKY transcription factor 33	0.03	Orthogroups_2024-Update
Sopen07g029640	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predicted GO
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Predicted GO
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Predicted GO
CC	GO:0005680	anaphase-promoting complex	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Predicted GO
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Predicted GO
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predicted GO
BP	GO:0010564	regulation of cell cycle process	IEP	Predicted GO
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
MF	GO:0016151	nickel cation binding	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predicted GO
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Predicted GO
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predicted GO
BP	GO:0033043	regulation of organelle organization	IEP	Predicted GO
BP	GO:0033044	regulation of chromosome organization	IEP	Predicted GO
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Predicted GO
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
BP	GO:0051783	regulation of nuclear division	IEP	Predicted GO
BP	GO:0051983	regulation of chromosome segregation	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0090231	regulation of spindle checkpoint	IEP	Predicted GO
BP	GO:0090266	regulation of mitotic cell cycle spindle assembly checkpoint	IEP	Predicted GO
BP	GO:1901976	regulation of cell cycle checkpoint	IEP	Predicted GO
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Predicted GO
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Predicted GO
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1903293	phosphatase complex	IEP	Predicted GO
BP	GO:1903504	regulation of mitotic spindle checkpoint	IEP	Predicted GO
BP	GO:1905818	regulation of chromosome separation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	173	232

External Links

No external refs found!

At2g40740

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation