HORVU1Hr1G008300.3

Description : MADS/AGL-type transcription factor

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU1Hr1G008300.3
Cluster	HCAA Clusters: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
A4A49_14235	No alias	developmental protein sepallata 1	0.03	Orthogroups_2024-Update
A4A49_18989	No alias	agamous-like mads-box protein agl19	0.03	Orthogroups_2024-Update
A4A49_19521	No alias	developmental protein sepallata 1	0.02	Orthogroups_2024-Update
A4A49_22632	No alias	floral homeotic protein agamous	0.02	Orthogroups_2024-Update
A4A49_27621	No alias	agamous-like mads-box protein agl9	0.03	Orthogroups_2024-Update
A4A49_28929	No alias	agamous-like mads-box protein agl8	0.04	Orthogroups_2024-Update
At5g51860	No alias	MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5]	0.04	Orthogroups_2024-Update
Bradi3g32090	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Bradi5g21700	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Brara.H01136.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02103.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.I03959.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I03965.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
GRMZM2G018589	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.02G179300	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Glyma.06G117600	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.08G250800	No alias	AGAMOUS-like 8	0.02	Orthogroups_2024-Update
Glyma.09G266400	No alias	AGAMOUS-like 6	0.02	Orthogroups_2024-Update
Glyma.10G240500	No alias	AGAMOUS-like 42	0.02	Orthogroups_2024-Update
Glyma.20G136600	No alias	AGAMOUS-like 62	0.04	Orthogroups_2024-Update
HORVU6Hr1G002270.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os02g36924	No alias	OsMADS27 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g03070	No alias	transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g11414	No alias	OsMADS58 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
Potri.004G002400	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Potri.014G021000	No alias	Function unknown	0.03	Orthogroups_2024-Update
Pp1s267_56V6	No alias	agamous-like protein	0.03	Orthogroups_2024-Update
Sobic.009G142500.1	No alias	component *(PISTILLATA) of AP3-PISTILLATA organ-identity...	0.02	Orthogroups_2024-Update
Sobic.010G221500.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g092950	No alias	MADS-box transcription factor (AHRD V3.3 *** A0A072TQ92_MEDTR)	0.02	Orthogroups_2024-Update
Solyc08g067230	No alias	MADS box transcription factor (AHRD V3.3 *** G3EIU8_9SOLA)	0.03	Orthogroups_2024-Update
Solyc12g056460	No alias	MADS box transcription factor (AHRD V3.3 *** C3PTE7_POPTO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Predicted GO
MF	GO:0004788	thiamine diphosphokinase activity	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
BP	GO:0006820	anion transport	IEP	Predicted GO
BP	GO:0006865	amino acid transport	IEP	Predicted GO
BP	GO:0009229	thiamine diphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
MF	GO:0016778	diphosphotransferase activity	IEP	Predicted GO
MF	GO:0030975	thiamine binding	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0042357	thiamine diphosphate metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	84	171
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

HORVU1Hr1G008300.3

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation