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  5. HORVU1Hr1G010280.1

HORVU1Hr1G010280.1


Description : Unknown function


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G010280.1
Cluster HCAA Clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Bradi1g54227 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Orthogroups_2024-Update
Bradi2g37270 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi5g09097 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
LOC_Os07g02910 No alias OsFBL33 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.2G016000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G019600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G023600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G017600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G140900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!