HORVU1Hr1G012190.1

Description : Unknown function

Gene families : OG_42_0000064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU1Hr1G012190.1
Cluster	HCAA Clusters: Cluster_257

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g01380	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
Bradi2g38987	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
Bradi2g39067	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.05	Orthogroups_2024-Update
Bradi2g39074	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Glyma.U031229	No alias	HOPZ-ACTIVATED RESISTANCE 1	0.02	Orthogroups_2024-Update
LOC_Os10g03570	No alias	RGH1A, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g14380	No alias	resistance protein LR10, putative, expressed	0.02	Orthogroups_2024-Update
Seita.3G317600.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.3G338500.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.8G130400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.8G182600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G062900.4	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G092200.1	No alias	Unknown function	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	Predicted GO
CC	GO:0005685	U1 snRNP	IEP	Predicted GO
BP	GO:0006376	mRNA splice site selection	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predicted GO
CC	GO:0120114	Sm-like protein family complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	196	423

External Links

No external refs found!