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  5. HORVU1Hr1G014030.2

HORVU1Hr1G014030.2


Description : Unknown function


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G014030.2
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Orthogroups_2024-Update
Bradi2g38440 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g18572 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G018974 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os10g35650 No alias expressed protein 0.04 Orthogroups_2024-Update
Seita.7G058000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G158000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G204600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G204800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G054200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G027600.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 658 685
IPR002885 Pentatricopeptide_repeat 519 546
IPR002885 Pentatricopeptide_repeat 128 157
IPR002885 Pentatricopeptide_repeat 475 506
IPR002885 Pentatricopeptide_repeat 299 332
IPR002885 Pentatricopeptide_repeat 550 577
IPR002885 Pentatricopeptide_repeat 690 737
IPR002885 Pentatricopeptide_repeat 584 632
IPR002885 Pentatricopeptide_repeat 233 282
IPR002885 Pentatricopeptide_repeat 338 386
IPR002885 Pentatricopeptide_repeat 411 457
No external refs found!