1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G016190.1

HORVU1Hr1G016190.1


Description : Unknown function


Gene families : OG_42_0004106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G016190.1
Cluster HCAA Clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Bradi2g38481 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g46220 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Brara.F03642.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_57592g0010 No alias (at3g09060 : 591.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
Seita.3G051300.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.5G265700.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen01g023670 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 409 441
IPR002885 Pentatricopeptide_repeat 304 335
IPR002885 Pentatricopeptide_repeat 174 221
IPR002885 Pentatricopeptide_repeat 447 495
IPR002885 Pentatricopeptide_repeat 587 633
IPR002885 Pentatricopeptide_repeat 342 391
IPR002885 Pentatricopeptide_repeat 519 566
IPR002885 Pentatricopeptide_repeat 241 286
No external refs found!