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  5. HORVU1Hr1G017970.4

HORVU1Hr1G017970.4


Description : MYB class-R2R3 subgroup-13 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G017970.4
Cluster HCAA Clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
At1g68320 No alias Transcription factor MYB62... 0.04 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Bradi5g20051 No alias myb domain protein 9 0.02 Orthogroups_2024-Update
Glyma.07G038000 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
Glyma.18G095600 No alias myb domain protein 101 0.04 Orthogroups_2024-Update
HORVU3Hr1G088870.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G023510.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G058620.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
LOC_Os02g49986 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g04820 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_2026g0010 No alias (p20025|myb38_maize : 264.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
Seita.8G006900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G074800.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G368500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G279100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G020200.2 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G224800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G112200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Solyc06g005310 No alias MYB transcription factor 0.03 Orthogroups_2024-Update
Solyc12g096200 No alias R2R3MYB transcription factor 6 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!