1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU1Hr1G018730.1

HORVU1Hr1G018730.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU1Hr1G018730.1
Cluster HCAA Clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Bradi3g47900 No alias cyclic nucleotide-gated channel 15 0.04 Orthogroups_2024-Update
Glyma.08G241600 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Glyma.09G168700 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Potri.017G067000 No alias cyclic nucleotide-gated channel 16 0.02 Orthogroups_2024-Update
Pp1s189_85V6 No alias cyclic nucleotide-gated ion 0.03 Orthogroups_2024-Update
Sobic.001G155100.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sopen03g028910 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 535 618
IPR005821 Ion_trans_dom 104 437
No external refs found!