HORVU1Hr1G020050.3

Description : histone *(H3)

Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU1Hr1G020050.3
Cluster	HCAA Clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
At1g13370	No alias	Histone H3-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX60]	0.03	Orthogroups_2024-Update
MA_10432805g0020	No alias	(at5g65360 : 226.0) Histone superfamily protein;...	0.04	Orthogroups_2024-Update
PSME_00037347-RA	No alias	(at5g10980 : 103.0) Histone superfamily protein;...	0.03	Orthogroups_2024-Update
Pp1s16_208V6	No alias	histone h3	0.03	Orthogroups_2024-Update
Pp1s410_38V6	No alias	histone h3	0.03	Orthogroups_2024-Update
Solyc01g073970	No alias	Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	14	145

External Links

No external refs found!